PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr6P02720_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family TCP
Protein Properties Length: 270aa    MW: 27963.1 Da    PI: 9.2816
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr6P02720_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP129.92.5e-4061150290
                    TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 
                            ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s++
  GSMUA_Achr6P02720_001  61 PPKRSSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSISAP 148
                            5899*****************************************************************9997666666666643333 PP

                    TCP  89 ka 90 
                            ++
  GSMUA_Achr6P02720_001 149 SH 150
                            22 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.7E-3966156IPR005333Transcription factor, TCP
PROSITE profilePS5136927.92367121IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MEGEAGGPRR PNFPLQLLEK KEEDSCSSSG YPSLAISSGH TGGGGGGCSH DPAANPARKL  60
PPKRSSTKDR HTKVDGRGRR IRMPALCAAR VFQLTRELGH KSDGETIEWL LQQAEPAVIA  120
ATGTGTIPAN FTSLNISLRS SGSSISAPSH LRAANYFNTA ATALAGQPLS SGGESIWTFP  180
QLGGSTSPTM FRGSLSSGLH FMNFPTPMAL LPSQQLGLGS STGGGEGHMG ILAALNAYRP  240
PPSTSEAAPS QSQQALGGSQ RHDTLNTSDS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009403173.11e-102PREDICTED: transcription factor TCP15-like
SwissprotQ9C9L27e-54TCP15_ARATH; Transcription factor TCP15
TrEMBLM0T3M00.0M0T3M0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P02720_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37443479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.15e-50TCP family protein